Key: Win : Draw : Loss
| Date | Home | Away | Ref | ||
|---|---|---|---|---|---|
| 03/08/2013 | Portsmouth | 1 | 4 | Oxford | G Ward |
| 10/08/2013 | Accrington | 2 | 2 | Portsmouth | E Ilderton |
| 17/08/2013 | Portsmouth | 3 | 0 | Morecambe | D Drysdale |
| 24/08/2013 | Mansfield | 2 | 2 | Portsmouth | S Martin |
| 31/08/2013 | Portsmouth | 0 | 2 | Chesterfield | S Bratt |
| 07/09/2013 | Cheltenham | 2 | 2 | Portsmouth | B Malone |
| 14/09/2013 | Burton | 1 | 2 | Portsmouth | D Whitestone |
| 21/09/2013 | Portsmouth | 0 | 1 | Fleetwood Town | G Horwood |
| 28/09/2013 | York | 4 | 2 | Portsmouth | M Heywood |
| 05/10/2013 | Portsmouth | 3 | 0 | Rochdale | S Hooper |
| 12/10/2013 | Plymouth | 1 | 1 | Portsmouth | S Martin |
| 19/10/2013 | Portsmouth | 1 | 0 | Bury | C Berry |
| 26/10/2013 | Torquay | 1 | 1 | Portsmouth | A Woolmer |
| 02/11/2013 | Portsmouth | 3 | 2 | Exeter | O Langford |
| 16/11/2013 | AFC Wimbledon | 4 | 0 | Portsmouth | R Lewis |
| 23/11/2013 | Portsmouth | 1 | 2 | Scunthorpe | T Kettle |
| 26/11/2013 | Portsmouth | 1 | 2 | Southend | K Hill |
| 30/11/2013 | Hartlepool | 0 | 0 | Portsmouth | P Tierney |
| 04/12/2013 | Portsmouth | 2 | 2 | Wycombe | D Drysdale |
| 14/12/2013 | Portsmouth | 0 | 2 | Newport County | D Deadman |
| 21/12/2013 | Bristol Rvs | 2 | 0 | Portsmouth | S Rushton |
| 26/12/2013 | Portsmouth | 1 | 0 | Dag and Red | G Salisbury |
| 29/12/2013 | Portsmouth | 0 | 0 | Northampton | G Ward |
| 01/01/2014 | Southend | 2 | 1 | Portsmouth | D Phillips |
| 11/01/2014 | Oxford | 0 | 0 | Portsmouth | M Heywood |
| 18/01/2014 | Portsmouth | 1 | 1 | Mansfield | D Sheldrake |
| 25/01/2014 | Morecambe | 2 | 2 | Portsmouth | A Haines |
| 28/01/2014 | Wycombe | 0 | 1 | Portsmouth | C Breakspear |
| 01/02/2014 | Portsmouth | 0 | 1 | Torquay | D Whitestone |
| 08/02/2014 | Exeter | 1 | 1 | Portsmouth | G Sutton |
| 15/02/2014 | Portsmouth | 1 | 0 | AFC Wimbledon | S Attwell |
| 22/02/2014 | Scunthorpe | 5 | 1 | Portsmouth | L Collins |
| 25/02/2014 | Portsmouth | 1 | 0 | Accrington | C Sarginson |
| 03/03/2014 | Chesterfield | 0 | 0 | Portsmouth | M Brown |
| 08/03/2014 | Portsmouth | 0 | 0 | Cheltenham | M Bull |
| 11/03/2014 | Portsmouth | 0 | 0 | Burton | C Berry |
| 15/03/2014 | Fleetwood Town | 3 | 1 | Portsmouth | I Williamson |
| 22/03/2014 | Portsmouth | 0 | 1 | York | R East |
| 25/03/2014 | Rochdale | 3 | 0 | Portsmouth | N Miller |
| 29/03/2014 | Newport County | 1 | 2 | Portsmouth | S Bratt |
| 05/04/2014 | Portsmouth | 1 | 0 | Hartlepool | A D'Urso |
| 12/04/2014 | Dag and Red | 1 | 4 | Portsmouth | S Martin |
| 19/04/2014 | Portsmouth | 3 | 2 | Bristol Rvs | J Adcock |
| 21/04/2014 | Northampton | 0 | 1 | Portsmouth | D Deadman |
| 26/04/2014 | Bury | 4 | 4 | Portsmouth | S Rushton |
| 03/05/2014 | Portsmouth | 3 | 3 | Plymouth | S Attwell |